cd ~dmenemen/llc_4320/regions/Boxes/Box04
cvs co MITgcm_code

qsub -I -q debug -l select=1:ncpus=16:model=san,walltime=2:00:00 -m abe -M menemenlis@me.com
qsub -I -q debug -l select=1:ncpus=20:model=ivy,walltime=2:00:00 -m abe -M menemenlis@me.com
qsub -I -q normal -l select=1:ncpus=16:model=san,walltime=8:00:00 -m abe -M menemenlis@me.com
qsub -I -q long -l select=1:ncpus=16:model=san,walltime=120:00:00 -m abe -M menemenlis@me.com

module purge
module load comp-intel/2015.0.090 mpi-sgi/mpt.2.12r23 netcdf/4.0
cd ~dmenemen/llc_4320/regions/Boxes/Box04/MITgcm
mkdir build run

cd ~dmenemen/llc_4320/regions/Boxes/Box04/MITgcm/build
../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas -mpi  -mods ../../code 
make depend
make -j 16

cd ~dmenemen/llc_4320/regions/Boxes/Box04/MITgcm/run
cp ../build/mitgcmuv .
ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
ln -sf /nobackup/dmenemen/forcing/ncep_rgau/runoff1p2472-360x180x12.bin .
ln -sf ../../run_template/* .
cp ../../input/* .
mpiexec -n 16 ./mitgcmuv